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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6874697 chr5:49640141 A/G LOC647121 chr1:121260910-121313686:+ 0.36 7.83 3.07E-14 Box Plot
THCA rs6874829 chr5:49653407 C/T LOC647121 chr1:121260910-121313686:+ 0.37 7.92 1.67E-14 Box Plot
THCA rs6875885 chr5:176571989 T/G LOC388955 chr2:63849182-63850159:- -0.69 -18.04 7.48E-56 Box Plot
THCA rs6876527 chr5:151668260 A/G FILIP1L chr3:99548985-99833357:- 0.21 6 3.82E-9 Box Plot
THCA rs6877611 chr5:176684905 G/T LOC388955 chr2:63849182-63850159:- 0.85 22.57 2.67E-77 Box Plot
THCA rs6878425 chr5:45843255 A/T LOC647121 chr1:121260910-121313686:+ 0.38 7.99 9.95E-15 Box Plot
THCA rs6879874 chr5:176730775 A/T LOC388955 chr2:63849182-63850159:- 0.6 14.88 1.97E-41 Box Plot
THCA rs6880798 chr5:176704457 C/T LOC388955 chr2:63849182-63850159:- 0.86 20.84 4.17E-69 Box Plot
THCA rs6882139 chr5:45897251 A/G LOC647121 chr1:121260910-121313686:+ 0.37 7.87 2.42E-14 Box Plot
THCA rs6882540 chr5:46346073 G/A LOC647121 chr1:121260910-121313686:+ -0.37 -7.96 1.23E-14 Box Plot
THCA rs6882591 chr5:176546460 G/A LOC388955 chr2:63849182-63850159:- -0.82 -21.4 9.68E-72 Box Plot
THCA rs6884716 chr5:46115369 C/G LOC647121 chr1:121260910-121313686:+ 0.38 8.12 4.03E-15 Box Plot
THCA rs688491 chr8:9884823 C/G SGK223 chr8:8175258-8244008:- 0.37 7.25 1.66E-12 Box Plot
THCA rs6885410 chr5:176740996 G/T LOC388955 chr2:63849182-63850159:- 0.53 13.61 6.86E-36 Box Plot
THCA rs6886255 chr5:176718361 A/G LOC388955 chr2:63849182-63850159:- 0.73 19.01 1.94E-60 Box Plot